Faster algorithms for RNA-folding using the Four-Russians method
نویسندگان
چکیده
منابع مشابه
Time and Space Efficient Algorithms for RNA Folding with the Four-Russians Technique
In this paper, we develop new algorithms for the basic RNA folding problem. Given an RNA sequence that contains n nucleotides, the goal of the problem is to compute a pseudoknot-free secondary structure that maximizes the number of base pairs in the sequence. We show that there exists a dynamic programming algorithm that can solve the problem in time O( n 3 log2 n ) while using only O( n 2 log2...
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در سال های اخیر، تقاضای استفاده از تئوری خطی ویسکوالاستیسیته بیشتر شده است. با افزایش استفاده از کامپوزیت های پیشرفته در صنایع هوایی و همچنین استفاده روزافزون از مواد پلیمری، اهمیت روش های دقیق طراحی و تحلیل چنین ساختارهایی بیشتر شده است. این مواد جدید از خودشان رفتارهای مکانیکی ارائه می دهند که با تئوری های الاستیسیته و ویسکوزیته، نمی توان آن ها را توصیف کرد. این مواد، خواص ویسکوالاستیک دارند....
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ژورنال
عنوان ژورنال: Algorithms for Molecular Biology
سال: 2014
ISSN: 1748-7188
DOI: 10.1186/1748-7188-9-5